All sorts of new stuff and modifications in the attempt -- so far

unsuccessful and perhaps ultimately doomed -- to wedge the Zthes
taxonomy model into a Zebra configuration.

diff --git a/examples/zthes/Zthes.abs b/examples/zthes/Zthes.abs
index a27b11d..5244150 100644 (file)
--- a/examples/zthes/Zthes.abs
+++ b/examples/zthes/Zthes.abs
@@ -1,5 +1,30 @@
-attset bib1.att
-tagset tagsetg.tag
+attset zthes.att
+tagset tagsetm-zthes.tag
+tagset tagsetg-zthes.tag
+tagset zthes.tag

 xpath enable
 
 xpath enable
 

-elm (2,1)      title   !
+elm (1,14)     termId                  !
+elm (2,1)      termName                !
+elm (4,1)      termQualifier           !
+elm (4,2)      termType                !
+elm (2,20)     termLanguage            !
+elm (2,17)     termNote                !
+elm (1,15)     termCreatedDate         !
+elm (1,27)     termCreatedBy           !
+elm (1,16)     termModifiedDate        !
+elm (1,28)     termModifiedBy          !
+
+elm (4,4)      postings                -
+elm (4,4)/(2,36)       sourceDb        -
+elm (4,4)/(4,5)                fieldName       -
+elm (4,4)/(4,6)                hitCount        -
+
+elm (2,30)     relation                -
+elm (2,30)/(4,3)       relationType    -
+elm (2,30)/(2,36)      sourceDb        -
+elm (2,30)/(1,14)      termId          -
+elm (2,30)/(2,1)       termName        -
+elm (2,30)/(4,1)       termQualifier   -
+elm (2,30)/(4,2)       termType        -
+elm (2,30)/(2,20)      termLanguage    -

diff --git a/examples/zthes/dino.tree b/examples/zthes/dino.tree
index ee95adc..a6853e6 100644 (file)
--- a/examples/zthes/dino.tree
+++ b/examples/zthes/dino.tree
@@ -1,43 +1,43 @@
 Dinosauria     The MRCA of Saurischia and Ornithischia, and its descendants
  *** Eoraptor  The most basal known dinosaur
 Dinosauria     The MRCA of Saurischia and Ornithischia, and its descendants
  *** Eoraptor  The most basal known dinosaur

- Saurischia
-  Sauropodomorpha
+ Saurischia    Everything closer to Megalosaurus than to Iguanodon
+  Sauropodomorpha      Sauropods and their ancestors and close relatives

    Brontosauria
     Plateosauria
      Massospondylidae
       Yunnanosaurinae
        *** Yunnanosaurus
    Brontosauria
     Plateosauria
      Massospondylidae
       Yunnanosaurinae
        *** Yunnanosaurus

-    Sauropoda
+    Sauropoda  Huge, long-necked herbivores

      Eusauropoda
      Eusauropoda

-      *** Jobaria
+      *** Jobaria      A surprisingly primitive Early Cretaceous form

       Neosauropoda
       Neosauropoda

-       Diplodocimorpha
+       Diplodocimorpha Diplodocus, Apatosaurus, Seismosaurus and kin

        Rebbachisauridae
         Rebbachisaurinae
        Rebbachisauridae
         Rebbachisaurinae

-         *** Rebbachisaurus
+         *** Rebbachisaurus    Had a sail on its back

        Macronaria
        Camarasauromorpha
         Titanosauriformes
          Brachiosauridae
        Macronaria
        Camarasauromorpha
         Titanosauriformes
          Brachiosauridae

-          *** Sauroposeidon
+          *** Sauroposeidon    The tallest known dinosaur (18m)

          Titanosauria
           Eutitanosauria
          Titanosauria
           Eutitanosauria

-           *** Argentinosaurus
-  Theropoda
+           *** Argentinosaurus The heaviest known dinosaur (100 tonnes)
+  Theropoda            Bipedal carnivores

    Neotheropoda
    Neotheropoda

-    Ceratosauria
+    Ceratosauria       May be polyphyletic if neoceratosaurs are tenanuran

      Coelophysoidea
       Coelophysidae
        Coelophysinae
      Coelophysoidea
       Coelophysidae
        Coelophysinae

-        *** Dilophosaurus
+        *** Dilophosaurus      Had a pair of long crests on its nose

      Neoceratosauria
       *** Xenotarsosaurus
     Tetanurae
      Neoceratosauria
       *** Xenotarsosaurus
     Tetanurae

-     Spinosauria
+     Spinosauria       Large carnivores with sails on their backs

       Spinosauridae
        Spinosaurinae
        Irritatorini
       Spinosauridae
        Spinosaurinae
        Irritatorini

-        *** Irritator
+        *** Irritator  

      Avetheropoda              aka. Neotetanurae
       Carnosauria              Previously used just to mean "large theropods"
        *** Fukuiraptor
      Avetheropoda              aka. Neotetanurae
       Carnosauria              Previously used just to mean "large theropods"
        *** Fukuiraptor

@@ -51,68 +51,69 @@ Dinosauria  The MRCA of Saurischia and Ornithischia, and its descendants
         Arctometatarsalia
          Ornithomimosauria
           *** Harpymimus
         Arctometatarsalia
          Ornithomimosauria
           *** Harpymimus

-        Tyrannosauroidea
+        Tyrannosauroidea       Includes early form Eotyrannus

          Tyrannosauridae
           Tyrannosaurinae
          Tyrannosauridae
           Tyrannosaurinae

-           Tyrannosaurini
+           Tyrannosaurini      Could be defined as {Tyrannosaurs+Tarbosaurus}

             *** Tyrannosaurus
        Maniraptora
             *** Tyrannosaurus
        Maniraptora

-        Oviraptorosauria
+        Oviraptorosauria       Includes Caenagnathidae

          Oviraptoridae
          Oviraptoridae

-          *** Oviraptor
-        Therizinosauria
+          *** Oviraptor        Some specimens found brooding their nests
+        Therizinosauria        Truly freaky long-necked, huge-clawed fatsos

          Therizinosauroidea
           Therizinosauridae
            *** Nanshiungosaurus
         Paraves
          Eumaniraptora
           Deinonychosauria
          Therizinosauroidea
           Therizinosauridae
            *** Nanshiungosaurus
         Paraves
          Eumaniraptora
           Deinonychosauria

-           Troodontidae
+           Troodontidae        Highest encephalisation quotient on known dinos

             *** Byronosaurus
            Dromaeosauridae
             Velociraptorinae
             *** Byronosaurus
            Dromaeosauridae
             Velociraptorinae

-             *** Velociraptor
+             *** Velociraptor  Much smaller in real life than in Jurassic Park

           Avialae
           Avialae

-           Aves
+           Aves                Birds, including modern birds

             Metornithes
             Metornithes

-             Alvarezsauria
+             Alvarezsauria     Short, stong args; long, gracile legs.  Weird

               Alvarezsauridae
               Alvarezsauridae

-               Mononykinae
+               Mononykinae     Hands had only a single, spike-like finger

                 *** Parvicursor
                 *** Parvicursor

- Ornithischia
+ Ornithischia  Everything closer to Iguanodon than to Megalosaurus

   Genasauria
   Genasauria

-   Thyreophora
+   Thyreophora The armoured dinosaurs, ankylosaurs and stegosaurs

     Thyreophoroidea
      Eurypoda
     Thyreophoroidea
      Eurypoda

-      Stegosauria
+      Stegosauria      Single or double row of plates down the back

        Stegosauridae
        Stegosauridae

-       *** Kentrosaurus
-      Ankylosauria
+       *** Kentrosaurus        Had spikes on its back instead of plates
+      Ankylosauria     Heavily armoured, above and below

        *** Minmi
        *** Minmi

-   Cerapoda
-    Marginocephalia
+   Cerapoda            Defined as {Triceratops+Iguanodon}
+    Marginocephalia    Defined as {Triceratops+Pachycephalosaurus}

      Ceratopsia
      Ceratopsia

-      Neoceratopsia
+      Neoceratopsia    Everything closer to Triceratops than to Psittacosaurus

        *** Udanoceratops
        Coronosauria
        Ceratopsoidea
         Ceratopsomorpha
        *** Udanoceratops
        Coronosauria
        Ceratopsoidea
         Ceratopsomorpha

-         *** Zuniceratops
-     Pachycephalosauria
+         Ceratopsidae  {Chasmosaurinae+Centrosaurinae}
+          *** Zuniceratops
+     Pachycephalosauria        Thick-headed, wide-bodied herbivorous bipeds

       *** Wannanosaurus
       *** Wannanosaurus

-    Ornithopoda
-     *** Qantassaurus
+    Ornithopoda                The least interesting of all the dinosaur groups
+     *** Qantassaurus  A profoundly dull basal ornithopod

      Euornithopoda
       Iguanodontia
        Euiguanodontia
        Dryomorpha
         Ankylopollexia
          Styracosterna
      Euornithopoda
       Iguanodontia
        Euiguanodontia
        Dryomorpha
         Ankylopollexia
          Styracosterna

-          *** Lurdosaurus
+          *** Lurdosaurus      Looks a lot like a fat Iguanodon

           Iguanodontoidea
            Hadrosauroidea
             Hadrosauridae
           Iguanodontoidea
            Hadrosauroidea
             Hadrosauridae

-             Euhadrosauria
-              Lambeosaurinae
+             Euhadrosauria     Lambeosaurs (crested) + Hadrosaurs (not)
+              Lambeosaurinae   The least dull of all the ornithopods

                Lambeosaurini
                 *** Corythosaurus
                Lambeosaurini
                 *** Corythosaurus

diff --git a/examples/zthes/tagsetg-zthes.tag b/examples/zthes/tagsetg-zthes.tag
new file mode 100644 (file)
index 0000000..63242cc
--- /dev/null
+++ b/examples/zthes/tagsetg-zthes.tag
@@ -0,0 +1,43 @@
+# TagSet-G Tags
+# $Id: tagsetg-zthes.tag,v 1.1 2002-12-01 23:25:06 mike Exp $
+# Hacked for Zthes: compare with ../../tab/tagsetg.tag
+name tagsetg
+reference TagsetG
+type 2
+
+tag    1       title/termName                          string
+tag    2       author                                  string
+tag    3       publicationPlace                        string
+tag    4       publicationDate/date-of-publication     string
+tag    5       documentId                              string
+tag    6       abstract                                string
+tag    7       name                                    string
+tag    8       dateTime                                generalizedtime
+tag    9       displayObject                           octetstring
+tag    10      organization/organisation               string
+tag    11      postalAddress                           string
+tag    12      networkAddress                          string
+tag    13      eMailAddress                            string
+tag    14      phoneNumber/telephone                   string
+tag    15      faxNumber/fax                           string
+tag    16      country                                 string
+tag    17      description                             string
+tag    18      time                                    intunit
+tag    19      documentcontent                         octetstring
+tag    20      language                                string
+tag    21      subject                                 string
+tag    22      resourceType                            string
+tag    23      city                                    string
+tag    24      stateOrProvince                         string
+tag    25      zipOrPostalCode                         string
+tag    26      cost                                    string
+tag    27      format                                  string
+tag    28      identifier                              string
+tag    29      rights                                  string
+tag    30      relation                                string
+tag    31      publisher                               string
+tag    32      contributor                             string
+tag    33      source                                  string
+tag    34      coverage                                string
+tag    35      private                                 string
+tag    36      sourceDb                                string

diff --git a/examples/zthes/tagsetg.tag b/examples/zthes/tagsetg.tag
deleted file mode 100644 (file)
index 6536cfe..0000000
--- a/examples/zthes/tagsetg.tag
+++ /dev/null
@@ -1,41 +0,0 @@
-# TagSet-G Tags
-# $Id: tagsetg.tag,v 1.1 2002-11-08 01:07:10 mike Exp $
-name tagsetg
-reference TagsetG
-type 2
-
-tag    1       termName                                string
-tag    2       author                                  string
-tag    3       publicationPlace                        string
-tag    4       publicationDate/date-of-publication     string
-tag    5       documentId                              string
-tag    6       abstract                                string
-tag    7       name                                    string
-tag    8       dateTime                                generalizedtime
-tag    9       displayObject                           octetstring
-tag    10      organization/organisation               string
-tag    11      postalAddress                           string
-tag    12      networkAddress                          string
-tag    13      eMailAddress                            string
-tag    14      phoneNumber/telephone                   string
-tag    15      faxNumber/fax                           string
-tag    16      country                                 string
-tag    17      description                             string
-tag    18      time                                    intunit
-tag    19      documentcontent                         octetstring
-tag    20      language                                string
-tag    21      subject                                 string
-tag    22      resourceType                            string
-tag    23      city                                    string
-tag    24      stateOrProvince                         string
-tag    25      zipOrPostalCode                         string
-tag    26      cost                                    string
-tag    27      format                                  string
-tag    28      identifier                              string
-tag    29      rights                                  string
-tag    30      relation                                string
-tag    31      publisher                               string
-tag    32      contributor                             string
-tag    33      source                                  string
-tag    34      coverage                                string
-tag    35      private                                 string

diff --git a/examples/zthes/tagsetm-zthes.tag b/examples/zthes/tagsetm-zthes.tag
new file mode 100644 (file)
index 0000000..50303fc
--- /dev/null
+++ b/examples/zthes/tagsetm-zthes.tag
@@ -0,0 +1,36 @@
+# TagSet-M Tags
+#
+# $Id: tagsetm-zthes.tag,v 1.1 2002-12-01 23:25:06 mike Exp $
+# Hacked for Zthes: compare with ../../tab/tagsetm.tag
+name tagsetm
+reference TagsetM
+type 1
+
+tag    1       schemaIdentifier                oid
+tag    2       elementsOrdered                 bool
+tag    3       elementOrdering                 int
+tag    4       defaultTagType                  int
+tag    5       defaultVariantSetId             oid
+tag    6       defaultVariantSpec              structured
+tag    7       processingInstructions          string
+tag    8       recordUsage                     int
+tag    9       restriction                     string
+tag    10      rank                            int
+tag    11      userMessage                     string
+tag    12      url                             string
+tag    13      record                          structured
+tag    14      local-control-number            string
+tag    15      creation-date                   generalizedtime
+tag    16      dateOfLastModification/lastModified generalizedtime
+tag    17      dateOfLastReview                generalizedtime
+tag    18      score                           int
+tag    19      wellKnown                       string
+tag    20      recordWrapper                   structured
+tag    21      defaultTagSetId                 oid
+tag    22      languageOfRecord                string
+tag    23      type                            string
+tag    24      scheme                          string
+tag    25      costInfo                        string
+tag    26      costFlag                        bool
+tag    27      termCreatedBy                   string
+tag    28      termModifiedBy                  string

diff --git a/examples/zthes/zebra.cfg b/examples/zthes/zebra.cfg
index b7cf63b..bf03a36 100644 (file)
--- a/examples/zthes/zebra.cfg
+++ b/examples/zthes/zebra.cfg
@@ -1,4 +1,4 @@
-# $Id: zebra.cfg,v 1.1 2002-11-08 01:07:10 mike Exp $
+# $Id: zebra.cfg,v 1.2 2002-12-01 23:25:06 mike Exp $

 profilePath: .:../../tab
 recordType: grs.sgml
 profilePath: .:../../tab
 recordType: grs.sgml

-attset: bib1.att
+#attset: bib1.att

diff --git a/examples/zthes/zthes.att b/examples/zthes/zthes.att
new file mode 100644 (file)
index 0000000..68c9d30
--- /dev/null
+++ b/examples/zthes/zthes.att
@@ -0,0 +1,28 @@
+# $Id: zthes.att,v 1.1 2002-12-01 23:25:06 mike Exp $
+# Zthes-1 Attribute Set
+name zthes
+reference Zthes
+
+att 1  termQualifier
+att 2  termType
+att 3  thesAdmin
+att 4  relatedTermID
+
+#   ###        The remainder of these "access points" are not really in the
+#      Zthes attribute set: see the definition in the profile at
+#              http://zthes.z3950.org/profile/current.html#3.5
+#      They're just here (for now) to shut Zebra up with all the
+#              Couldn't find att 'termId' in attset
+#      messages that it emits, until such time as we add the tab
+#      files for the Utility and Cross Domain attribute sets (which,
+#      by the way, I can't believe are not yet part of the Zebra
+#      distribution.)
+
+att 1001       termId
+att 1002       termName
+att 1003       termLanguage
+att 1004       termNote
+att 1005       termCreatedDate
+att 1006       termCreatedBy
+att 1007       termModifiedDate
+att 1008       termModifiedBy

diff --git a/examples/zthes/zthes.tag b/examples/zthes/zthes.tag
new file mode 100644 (file)
index 0000000..98ded3e
--- /dev/null
+++ b/examples/zthes/zthes.tag
@@ -0,0 +1,14 @@
+# $Id: zthes.tag,v 1.1 2002-12-01 23:25:06 mike Exp $
+# Zthes Tags -- see
+#      http://zthes.z3950.org/profile/current.html#3.2
+
+name zthes
+reference Zthes
+type 4
+
+tag    1  termQualifier        string
+tag    2  termType             string  
+tag    3  relationType         string
+tag    4  postings             structured  
+tag    5  fieldName            string
+tag    6  hitCount             int