<chapter id="examples">
- <!-- $Id: examples.xml,v 1.8 2002-10-10 14:27:18 heikki Exp $ -->
+ <!-- $Id: examples.xml,v 1.24 2006-09-22 12:34:45 adam Exp $ -->
<title>Example Configurations</title>
- <sect1>
+ <sect1 id="examples-overview">
<title>Overview</title>
<para>
- <literal>zebraidx</literal> and <literal>zebrasrv</literal> are both
+ <command>zebraidx</command> and
+ <command>zebrasrv</command> are both
driven by a master configuration file, which may refer to other
subsidiary configuration files. By default, they try to use
<filename>zebra.cfg</filename> in the working directory as the
- master file; but this can be changed using the <literal>-t</literal>
+ master file; but this can be changed using the <literal>-c</literal>
option to specify an alternative master configuration file.
</para>
<para>
<listitem>
<para>
- Where to find subsidiary configuration files, including
- <literal>default.idx</literal>
+ Where to find subsidiary configuration files, including both
+ those that are named explicitly and a few ``magic'' files such
+ as <literal>default.idx</literal>,
which specifies the default indexing rules.
</para>
</listitem>
<listitem>
<para>
- What attribute sets to recognise in searches.
+ What record schemas to support. (Subsidiary files specifiy how
+ to index the contents of records in those schemas, and what
+ format to use when presenting records in those schemas to client
+ software.)
</para>
</listitem>
<listitem>
<para>
- Policy details such as what record type to expect, what
- low-level indexing algorithm to use, how to identify potential
- duplicate records, etc.
+ What attribute sets to recognise in searches. (Subsidiary files
+ specify how to interpret the attributes in terms
+ of the indexes that are created on the records.)
+ </para>
+ </listitem>
+
+ <listitem>
+ <para>
+ Policy details such as what type of input format to expect when
+ adding new records, what low-level indexing algorithm to use,
+ how to identify potential duplicate records, etc.
</para>
</listitem>
<para>
This example shows how Zebra can be used with absolutely minimal
configuration to index a body of
- <ulink url="http://www.w3.org/xml/###">XML</ulink>
+ <ulink url="&url.xml;">XML</ulink>
documents, and search them using
- <ulink url="http://www.w3.org/xpath/###">XPath</ulink>
+ <ulink url="&url.xpath;">XPath</ulink>
expressions to specify access points.
</para>
<para>
- Go to the <literal>examples/dinosauricon</literal> subdirectory
+ Go to the <literal>examples/zthes</literal> subdirectory
of the distribution archive.
- There you will find a <literal>records</literal> subdirectory,
- which contains some raw XML data to be added to the database: in
- this case, as single file, <literal>genera.xml</literal>,
- which contain information about all the known dinosaur genera as of
- August 2002.
+ There you will find a <literal>Makefile</literal> that will
+ populate the <literal>records</literal> subdirectory with a file of
+ <ulink url="http://zthes.z3950.org/">Zthes</ulink>
+ records representing a taxonomic hierarchy of dinosaurs. (The
+ records are generated from the family tree in the file
+ <literal>dino.tree</literal>.)
+ Type <literal>make records/dino.xml</literal>
+ to make the XML data file.
+ (Or you could just type <literal>make dino</literal> to build the XML
+ data file, create the database and populate it with the taxonomic
+ records all in one shot - but then you wouldn't learn anything,
+ would you? :-)
</para>
<para>
- Now we need to create the Zebra database, which we do with the
- Zebra indexer, <literal>zebraidx</literal>, which is
+ Now we need to create a Zebra database to hold and index the XML
+ records. We do this with the
+ Zebra indexer, <command>zebraidx</command>, which is
driven by the <literal>zebra.cfg</literal> configuration file.
For our purposes, we don't need any
- special behaviour - we can use the defaults - so we start with a
- minimal file that just tells <literal>zebraidx</literal> where to
+ special behaviour - we can use the defaults - so we can start with a
+ minimal file that just tells <command>zebraidx</command> where to
find the default indexing rules, and how to parse the records:
<screen>
- profilePath: .:../../tab:../../../yaz/tab
+ profilePath: .:../../tab
recordType: grs.sgml
</screen>
</para>
XPath-based boolean queries and fetch the XML records that satisfy
them:
<screen>
- $ yaz-client tcp:@:9999
+ $ yaz-client @:9999
Connecting...Ok.
- Z> find @attr 1=/GENUS/MEANING @and lizard earthquakes
+ Z> find @attr 1=/Zthes/termName Sauroposeidon
Number of hits: 1
Z> format xml
Z> show 1
- <GENUS name="Sauroposeidon" type="with">
- <MEANING>lizard Poseidon <LOW>(Greek god of, among other things, earthquakes)</LOW></MEANING>
- <SPECIES name="proteles">
- <AUTHOR type="vide" name="Franklin" year="2000"></AUTHOR>
- <AUTHOR name="Wedel, Cifelli, Sanders"></AUTHOR>
- </SPECIES>
- <PLACE name="Oklahoma"></PLACE>
- <TIME value="Albian"></TIME>
- <LENGTH value="30" q="1"></LENGTH>
- <REMAINS content="rib, cervical vertebrae"></REMAINS>
- <ESSAY>
- <P> This new <NOMEN name="Brachiosaurus"></NOMEN>-like <LINK content="dinosaur"></LINK>
- was perhaps the tallest. With its head raised, it stood 60 feet (nearly
- 20 m) tall. </P>
- </ESSAY>
+ <Zthes>
+ <termId>22</termId>
+ <termName>Sauroposeidon</termName>
+ <termType>PT</termType>
+ <termNote>The tallest known dinosaur (18m)</termNote>
+ <relation>
+ <relationType>BT</relationType>
+ <termId>21</termId>
+ <termName>Brachiosauridae</termName>
+ <termType>PT</termType>
+ </relation>
<idzebra xmlns="http://www.indexdata.dk/zebra/">
- <size>593</size>
- <localnumber>891</localnumber>
- <filename>records/genera.xml</filename>
+ <size>300</size>
+ <localnumber>23</localnumber>
+ <filename>records/dino.xml</filename>
</idzebra>
- </GENUS>
+ </Zthes>
</screen>
</para>
<para>
- Now wasn't that easy?
+ Now wasn't that nice and easy?
</para>
</sect1>
+
<sect1 id="example2">
- <title>Example 2: Supporting Z39.50 Searches</title>
+ <title>Example 2: Supporting Interoperable Searches</title>
<para>
- You may have noticed as <literal>zebraidx</literal> was building
- the database that it issued a warning, which we ignored at the
- time:
- <screen>
- $ zebraidx update records
- 00:45:46-08/10: ../../index/zebraidx(5016) [warn] records/genera.xml:0 Couldn't open GENUS.abs [No such file or directory]
- </screen>
- <!-- FIXME ### This needs more text -->
+ The problem with the previous example is that you need to know the
+ structure of the documents in order to find them. For example,
+ when we wanted to find the record for the taxon
+ <foreignphrase role="taxon">Sauroposeidon</foreignphrase>,
+ we had to formulate a complex XPath
+ <literal>/Zthes/termName</literal>
+ which embodies the knowledge that taxon names are specified in a
+ <literal><termName></literal> element inside the top-level
+ <literal><Zthes></literal> element.
+ </para>
+ <para>
+ This is bad not just because it requires a lot of typing, but more
+ significantly because it ties searching semantics to the physical
+ structure of the searched records. You can't use the same search
+ specification to search two databases if their internal
+ representations are different. Consider a different taxonomy
+ database in which the records have taxon names specified
+ inside a <literal><name></literal> element nested within a
+ <literal><identification></literal> element
+ inside a top-level <literal><taxon></literal> element: then
+ you'd need to search for them using
+ <literal>1=/taxon/identification/name</literal>
+ </para>
+ <para>
+ How, then, can we build broadcasting Information Retrieval
+ applications that look for records in many different databases?
+ The Z39.50 protocol offers a powerful and general solution to this:
+ abstract ``access points''. In the Z39.50 model, an access point
+ is simply a point at which searches can be directed. Nothing is
+ said about implementation: in a given database, an access point
+ might be implemented as an index, a path into physical records, an
+ algorithm for interrogating relational tables or whatever works.
+ The only important thing is that the semantics of an access
+ point is fixed and well defined.
+ </para>
+ <para>
+ For convenience, access points are gathered into <firstterm>attribute
+ sets</firstterm>. For example, the BIB-1 attribute set is supposed to
+ contain bibliographic access points such as author, title, subject
+ and ISBN; the GEO attribute set contains access points pertaining
+ to geospatial information (bounding coordinates, stratum, latitude
+ resolution, etc.); the CIMI
+ attribute set contains access points to do with museum collections
+ (provenance, inscriptions, etc.)
+ </para>
+ <para>
+ In practice, the BIB-1 attribute set has tended to be a dumping
+ ground for all sorts of access points, so that, for example, it
+ includes some geospatial access points as well as strictly
+ bibliographic ones. Nevertheless, this model
+ allows a layer of abstraction over the physical representation of
+ records in databases.
</para>
+ <para>
+ In the BIB-1 attribute set, a taxon name is probably best
+ interpreted as a title - that is, a phrase that identifies the item
+ in question. BIB-1 represents title searches by
+ access point 4. (See
+ <ulink url="&url.z39.50.bib1.semantics;">The BIB-1 Attribute
+ Set Semantics</ulink>)
+ So we need to configure our dinosaur database so that searches for
+ BIB-1 access point 4 look in the
+ <literal><termName></literal> element,
+ inside the top-level
+ <literal><Zthes></literal> element.
+ </para>
+ <para>
+ This is a two-step process. First, we need to tell Zebra that we
+ want to support the BIB-1 attribute set. Then we need to tell it
+ which elements of its record pertain to access point 4.
+ </para>
+ <para>
+ We need to create an <link linkend="abs-file">Abstract Syntax
+ file</link> named after the document element of the records we're
+ working with, plus a <literal>.abs</literal> suffix - in this case,
+ <literal>Zthes.abs</literal> - as follows:
+ </para>
+ <programlistingco>
+ <areaspec>
+ <area id="attset.zthes" coords="2"/>
+ <area id="attset.attset" coords="3"/>
+ <area id="termId" coords="7"/>
+ <area id="termName" coords="8"/>
+ </areaspec>
+ <programlisting>
+attset zthes.att
+attset bib1.att
+xpath enable
+systag sysno none
+
+xelm /Zthes/termId termId:w
+xelm /Zthes/termName termName:w,title:w
+xelm /Zthes/termQualifier termQualifier:w
+xelm /Zthes/termType termType:w
+xelm /Zthes/termLanguage termLanguage:w
+xelm /Zthes/termNote termNote:w
+xelm /Zthes/termCreatedDate termCreatedDate:w
+xelm /Zthes/termCreatedBy termCreatedBy:w
+xelm /Zthes/termModifiedDate termModifiedDate:w
+xelm /Zthes/termModifiedBy termModifiedBy:w
+ </programlisting>
+ <calloutlist>
+ <callout arearefs="attset.zthes">
+ <para>
+ Declare Thesausus attribute set. See <filename>zthes.att</filename>.
+ </para>
+ </callout>
+ <callout arearefs="attset.attset">
+ <para>
+ Declare Bib-1 attribute set. See <filename>bib1.att</filename> in
+ Zebra's <filename>tab</filename> directory.
+ </para>
+ </callout>
+ <callout arearefs="termId">
+ <para>
+ This xelm directive selects contents of nodes by XPath expression
+ <literal>/Zthes/termId</literal>. The contents (CDATA) will be
+ word searchable by Zthes attribute termId (value 1001).
+ </para>
+ </callout>
+ <callout arearefs="termName">
+ <para>
+ Make <literal>termName</literal> word searchable by both
+ Zthes attribute termName (1002) and Bib-1 atttribute title (4).
+ </para>
+ </callout>
+ </calloutlist>
+ </programlistingco>
+ <para>
+ After re-indexing, we can search the database using Bib-1
+ attribute, title, as follows:
+ <screen>
+Z> form xml
+Z> f @attr 1=4 Eoraptor
+Sent searchRequest.
+Received SearchResponse.
+Search was a success.
+Number of hits: 1, setno 1
+SearchResult-1: Eoraptor(1)
+records returned: 0
+Elapsed: 0.106896
+Z> s
+Sent presentRequest (1+1).
+Records: 1
+[Default]Record type: XML
+<Zthes>
+ <termId>2</termId>
+ <termName>Eoraptor</termName>
+ <termType>PT</termType>
+ <termNote>The most basal known dinosaur</termNote>
+ ...
+ </screen>
+ </para>
</sect1>
</chapter>
-<!--
-
- <listitem>
- <para>
- The master configuration file, <literal>zebra.cfg</literal>,
- which is as short and simple as it can be:
- <screen>
- # $Header: /home/cvsroot/idis/doc/examples.xml,v 1.8 2002-10-10 14:27:18 heikki Exp $
- # Bare-bones master configuration file for Zebra
- profilePath: .:../../tab:../../../yaz/tab
- </screen>
- Apart from the comments, which are ignored, all this specifies is
- that the server should recognise the attribute set described in
- the file called
- <literal>bib1.att</literal>.
- ### What is an attribute set?
- </para>
- </listitem>
-
- <listitem>
- <para>
- The BIB-1 attribute set configuration file,
- <literal>bib1.att</literal>, which is also as short as possible:
- <screen>
- # $Header: /home/cvsroot/idis/doc/examples.xml,v 1.8 2002-10-10 14:27:18 heikki Exp $
- # Bare-bones BIB-1 attribute set file for Zebra
- reference Bib-1
- </screen>
- Apart from the comments, all this specifies is that reference of
- the attribute set described by this file is
- <literal>Bib-1</literal>, a name recognised by the system as
- referring to a well-known opaque identifier that is transmitted
- by clients as part of their searches.
- ### Yeuch! Surely we can say that better!
- </para>
- <para>
- ### Can't we somehow say this trivial thing in the main
- configuration file?
- </para>
- </listitem>
--->
<!--
The simplest hello-world example could go like this:
</caption>
</mediaobject>
-Whene the three <*object> thingies inside the top-level <mediaobject>
+Where the three <*object> thingies inside the top-level <mediaobject>
are decreasingly preferred version to include depending on what the
rendering engine can handle. I generated the EPS version of the image
by exporting a line-drawing done in TGIF, then converted that to the